EnhancerDB
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  3. rs572507274[chr1:224383821]
Enhancers that have rs572507274[chr1:224383821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs572507274[chr1:224383821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224383815 224383830 HNF1A JASPAR yes 35692422
chr1 224383816 224383829 HNF1B JASPAR yes 35692423
chr1 224383817 224383821 H1TF2 TRANSFAC yes 35692424
chr1 224383817 224383821 NFE TRANSFAC yes 35692425
chr1 224383817 224383821 SRF TRANSFAC yes 35692426
chr1 224383817 224383829 HNF1B JASPAR yes 35692427
Genes associated with rs572507274[chr1:224383821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More