EnhancerDB
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  3. rs572530230[chr1:235250770]
Enhancers that have rs572530230[chr1:235250770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs572530230[chr1:235250770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235250206 235250986 ZNF274 GTRD no Liver (HepG2) 21403610
chr1 235250227 235250943 ZNF274 GTRD no Liver (HepG2) 21403611
chr1 235250305 235250849 ZNF274 GTRD no Liver (HepG2) 21403612
chr1 235250333 235250796 ZNF274 GTRD no Liver (HepG2) 21403613
chr1 235250337 235250929 ZNF274 GTRD no Liver (HepG2) 21403614
chr1 235250481 235250855 ZNF274 GTRD no Liver (HepG2) 21403618
chr1 235250489 235250865 ZNF274 GTRD no Liver (HepG2) 21403619
chr1 235250492 235250920 ZNF274 GTRD no Liver (HepG2) 21403620
chr1 235250766 235250785 PITX2 TRANSFAC yes 36350389
Genes associated with rs572530230[chr1:235250770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More