EnhancerDB
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  3. rs572540719[chr1:9517882]
Enhancers that have rs572540719[chr1:9517882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572540719[chr1:9517882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9517864 9517885 IRF1 JASPAR yes 26653467
chr1 9517866 9517886 RREB1 JASPAR yes 26653468
chr1 9517869 9517884 FOXP1 JASPAR yes 26653470
chr1 9517869 9517890 IRF1 JASPAR yes 26653471
chr1 9517871 9517891 RREB1 JASPAR yes 26653472
chr1 9517874 9517886 IRF1 JASPAR yes 26653473
chr1 9517874 9517889 FOXP1 JASPAR yes 26653474
chr1 9517874 9517895 IRF1 JASPAR yes 26653475
chr1 9517876 9517896 RREB1 JASPAR yes 26653476
chr1 9517879 9517891 IRF1 JASPAR yes 26653477
chr1 9517879 9517894 FOXP1 JASPAR yes 26653478
chr1 9517879 9517900 IRF1 JASPAR yes 26653479
chr1 9517881 9517901 RREB1 JASPAR yes 26653480
Genes associated with rs572540719[chr1:9517882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More