EnhancerDB
  1. Home
  2. SNP
  3. rs572606718[chr3:56800394]
Enhancers that have rs572606718[chr3:56800394]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56786742 56805635 enh20640
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs572606718[chr3:56800394]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56800393 56800409 RFX2 JASPAR yes 2591958
chr3 56800393 56800409 RFX3 JASPAR yes 2591959
chr3 56800393 56800409 RFX4 JASPAR yes 2591960
chr3 56800393 56800409 RFX5 JASPAR yes 2591961
chr3 56800394 56800413 RFX2 JASPAR yes 2591962
Genes associated with rs572606718[chr3:56800394], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More