EnhancerDB
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  3. rs572640226[chr3:57946617]
Enhancers that have rs572640226[chr3:57946617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57932901 57950075 enh20645
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572640226[chr3:57946617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57946613 57946618 SP1 TRANSFAC yes 2657849
chr3 57946614 57946619 SP1 TRANSFAC yes 2657850
chr3 57946614 57946623 THAP1 JASPAR yes 2657851
chr3 57946617 57946621 LFA1 TRANSFAC yes 2657852
Genes associated with rs572640226[chr3:57946617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More