EnhancerDB
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  3. rs572798342[chr2:39645342]
Enhancers that have rs572798342[chr2:39645342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs572798342[chr2:39645342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39645340 39645355 FOXP1 JASPAR yes 73199161
chr2 39645341 39645356 FOXP1 JASPAR yes 73199162
chr2 39645342 39645357 FOXP1 JASPAR yes 73199163
Genes associated with rs572798342[chr2:39645342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More