EnhancerDB
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  3. rs572814068[chr6:34580205]
Enhancers that have rs572814068[chr6:34580205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34574305 34581193 enh38949
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572814068[chr6:34580205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34580196 34580208 MEF2A JASPAR yes 101225082
chr6 34580196 34580208 MEF2B JASPAR yes 101225083
chr6 34580196 34580208 MEF2D JASPAR yes 101225084
chr6 34580198 34580209 CDX2 JASPAR yes 101225085
chr6 34580199 34580210 HOXA10 JASPAR yes 101225086
chr6 34580200 34580209 CDX1 JASPAR yes 101225087
chr6 34580200 34580210 HOXA13 JASPAR yes 101225088
chr6 34580200 34580210 HOXB13 JASPAR yes 101225089
chr6 34580200 34580210 HOXD13 JASPAR yes 101225090
chr6 34580200 34580215 FOXP1 JASPAR yes 101225091
chr6 34580200 34580215 MEF2C JASPAR yes 101225092
chr6 34580201 34580216 MEF2A JASPAR yes 101225093
chr6 34580202 34580214 FOXC2 JASPAR yes 101225094
chr6 34580202 34580214 MEF2A JASPAR yes 101225095
chr6 34580202 34580214 MEF2B JASPAR yes 101225096
chr6 34580202 34580214 MEF2D JASPAR yes 101225097
chr6 34580203 34580213 MEF2A JASPAR yes 101225098
Genes associated with rs572814068[chr6:34580205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More