EnhancerDB
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  3. rs572850929[chr17:78719805]
Enhancers that have rs572850929[chr17:78719805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs572850929[chr17:78719805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78719795 78719810 MEF2C JASPAR yes 56274236
chr17 78719796 78719811 MEF2A JASPAR yes 56274237
chr17 78719797 78719809 MEF2A JASPAR yes 56274238
chr17 78719797 78719809 MEF2B JASPAR yes 56274239
chr17 78719797 78719809 MEF2D JASPAR yes 56274240
chr17 78719798 78719808 MEF2A JASPAR yes 56274241
chr17 78719805 78719809 TEAD2 TRANSFAC yes 56274242
chr17 78719805 78719810 TBP TRANSFAC yes 56274243
chr17 78719805 78719811 TFIID TRANSFAC yes 56274244
Genes associated with rs572850929[chr17:78719805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More