EnhancerDB
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  3. rs572880231[chr3:10239554]
Enhancers that have rs572880231[chr3:10239554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 10220648 10240655 enh20318
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572880231[chr3:10239554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 10239535 10239556 IRF1 JASPAR yes 363550
chr3 10239551 10239555 YY1 TRANSFAC yes 363552
Genes associated with rs572880231[chr3:10239554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More