EnhancerDB
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  3. rs572887549[chr17:1888754]
Enhancers that have rs572887549[chr17:1888754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572887549[chr17:1888754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1888747 1888757 ZNF740 JASPAR yes 52712685
chr17 1888748 1888762 ZIC1 JASPAR yes 52712686
chr17 1888748 1888763 ZIC3 JASPAR yes 52712687
chr17 1888748 1888763 ZIC4 JASPAR yes 52712688
chr17 1888751 1888757 SP1 TRANSFAC yes 52712689
Genes associated with rs572887549[chr17:1888754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More