EnhancerDB
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  3. rs572965613[chr1:27922024]
Enhancers that have rs572965613[chr1:27922024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs572965613[chr1:27922024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27922013 27922025 ZBTB7B JASPAR yes 27713989
chr1 27922018 27922029 CDX2 JASPAR yes 27713990
chr1 27922018 27922035 RXRA JASPAR yes 27713991
chr1 27922019 27922030 HOXA10 JASPAR yes 27713993
chr1 27922019 27922030 HOXC11 JASPAR yes 27713994
chr1 27922019 27922030 HOXC12 JASPAR yes 27713995
chr1 27922019 27922030 HOXC13 JASPAR yes 27713996
chr1 27922019 27922030 HOXD12 JASPAR yes 27713997
chr1 27922020 27922029 CDX1 JASPAR yes 27713998
chr1 27922020 27922030 HOXA13 JASPAR yes 27713999
chr1 27922020 27922030 HOXC10 JASPAR yes 27714000
chr1 27922020 27922030 HOXD11 JASPAR yes 27714001
chr1 27922020 27922030 HOXD13 JASPAR yes 27714002
Genes associated with rs572965613[chr1:27922024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More