EnhancerDB
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  3. rs573039137[chr17:25899424]
Enhancers that have rs573039137[chr17:25899424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 25898536 25901861 vista677
VISTA
Transcript factors that have rs573039137[chr17:25899424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25899414 25899435 IRF1 JASPAR yes 9046
chr17 25899414 25899435 IRF1 JASPAR yes 53647204
chr17 25899417 25899427 GABPA JASPAR yes 9047
chr17 25899417 25899427 GABPA JASPAR yes 53647205
chr17 25899417 25899431 SPI1 JASPAR yes 9048
chr17 25899417 25899431 SPIC JASPAR yes 9049
chr17 25899417 25899431 SPI1 JASPAR yes 53647206
chr17 25899417 25899431 SPIC JASPAR yes 53647207
chr17 25899419 25899425 ETS1 JASPAR yes 9050
chr17 25899419 25899425 SPI1 JASPAR yes 9051
chr17 25899419 25899425 ETS1 JASPAR yes 53647208
chr17 25899419 25899425 SPI1 JASPAR yes 53647209
chr17 25899424 25899436 IRF1 JASPAR yes 9052
chr17 25899424 25899436 IRF1 JASPAR yes 53647210
Genes associated with rs573039137[chr17:25899424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More