EnhancerDB
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  3. rs573187820[chr17:78760766]
Enhancers that have rs573187820[chr17:78760766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs573187820[chr17:78760766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78760756 78760771 MEF2C JASPAR yes 56279493
chr17 78760757 78760769 MEF2A JASPAR yes 56279494
chr17 78760761 78760771 HOXA13 JASPAR yes 56279496
chr17 78760761 78760771 HOXB13 JASPAR yes 56279497
chr17 78760761 78760771 HOXD13 JASPAR yes 56279498
chr17 78760762 78760771 CDX1 JASPAR yes 56279499
chr17 78760762 78760773 CDX2 JASPAR yes 56279500
Genes associated with rs573187820[chr17:78760766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More