EnhancerDB
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  3. rs573228030[chr4:88438266]
Enhancers that have rs573228030[chr4:88438266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 88437265 88449055 enh8083
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs573228030[chr4:88438266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 88438251 88438272 IRF1 JASPAR yes 91123227
chr4 88438253 88438268 PRDM1 JASPAR yes 91123228
chr4 88438254 88438268 SPIC JASPAR yes 91123230
chr4 88438254 88438268 STAT1 JASPAR yes 91123231
chr4 88438255 88438269 IRF7 JASPAR yes 91123232
chr4 88438255 88438269 IRF8 JASPAR yes 91123233
Genes associated with rs573228030[chr4:88438266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More