EnhancerDB
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  3. rs573275346[chr16:85623172]
Enhancers that have rs573275346[chr16:85623172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573275346[chr16:85623172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85623160 85623807 TCF7L2 GTRD no Colon (HCT116) 21730679
chr16 85623160 85623807 TCF7L2 GTRD no Colon (HCT116) 108216734
chr16 85623170 85623989 ZNF274 GTRD no Blood (GM12878) 108216735
chr16 85623170 85626962 TCF7L2 GTRD no Colon (HCT116) 21730680
chr16 85623170 85626962 TCF7L2 GTRD no Colon (HCT116) 108216736
chr16 85623171 85623175 YY1 TRANSFAC yes 12080848
Genes associated with rs573275346[chr16:85623172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More