EnhancerDB
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  3. rs573286993[chr1:54824479]
Enhancers that have rs573286993[chr1:54824479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs573286993[chr1:54824479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54824469 54824483 POU4F1 JASPAR yes 28977283
chr1 54824469 54824485 POU4F2 JASPAR yes 28977284
chr1 54824469 54824485 POU4F3 JASPAR yes 28977285
chr1 54824472 54824486 TCF7L2 JASPAR yes 28977286
chr1 54824472 54824487 LEF1 JASPAR yes 28977287
Genes associated with rs573286993[chr1:54824479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More