EnhancerDB
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  3. rs573394504[chr17:59404400]
Enhancers that have rs573394504[chr17:59404400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs573394504[chr17:59404400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59404393 59404404 FOSL2 JASPAR yes 55148891
chr17 59404395 59404408 SMAD2 JASPAR yes 55148892
chr17 59404398 59404408 TBR1 JASPAR yes 55148893
chr17 59404399 59404409 TBX21 JASPAR yes 55148894
chr17 59404400 59404408 MGA JASPAR yes 55148895
chr17 59404400 59404408 TBX15 JASPAR yes 55148896
chr17 59404400 59404408 TBX1 JASPAR yes 55148897
chr17 59404400 59404408 TBX4 JASPAR yes 55148898
chr17 59404400 59404408 TBX5 JASPAR yes 55148899
chr17 59404400 59404409 ZEB1 JASPAR yes 55148900
chr17 59404400 59404412 PKNOX1 JASPAR yes 55148901
chr17 59404400 59404412 TGIF1 JASPAR yes 55148902
chr17 59404400 59404413 ZBTB18 JASPAR yes 55148903
Genes associated with rs573394504[chr17:59404400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More