EnhancerDB
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  3. rs573558188[chr12:96802599]
Enhancers that have rs573558188[chr12:96802599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs573558188[chr12:96802599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96802581 96802602 IRF1 JASPAR yes 123066888
chr12 96802583 96802604 IRF1 JASPAR yes 123066890
chr12 96802584 96802599 FOXP1 JASPAR yes 123066891
chr12 96802585 96802600 STAT2 JASPAR yes 123066892
chr12 96802585 96802606 IRF1 JASPAR yes 123066893
chr12 96802586 96802601 FOXP1 JASPAR yes 123066894
chr12 96802587 96802608 IRF1 JASPAR yes 123066895
chr12 96802591 96802605 SPIC JASPAR yes 123066896
chr12 96802591 96802606 PRDM1 JASPAR yes 123066897
chr12 96802591 96802612 IRF1 JASPAR yes 123066898
chr12 96802595 96802616 IRF1 JASPAR yes 123066899
chr12 96802599 96802614 PRDM1 JASPAR yes 123066900
chr12 96802599 96802614 STAT2 JASPAR yes 123066901
Genes associated with rs573558188[chr12:96802599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More