EnhancerDB
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  3. rs573595609[chr17:1893100]
Enhancers that have rs573595609[chr17:1893100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573595609[chr17:1893100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1893083 1893101 RARA JASPAR yes 52713423
chr17 1893090 1893103 NR2F1 JASPAR yes 52713424
chr17 1893092 1893107 JUND JASPAR yes 52713425
chr17 1893093 1893106 JUN JASPAR yes 52713426
chr17 1893094 1893102 CREB1 JASPAR yes 52713427
chr17 1893094 1893111 RXRA JASPAR yes 52713428
Genes associated with rs573595609[chr17:1893100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More