EnhancerDB
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  3. rs573610856[chr18:56209361]
Enhancers that have rs573610856[chr18:56209361]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56204885 56211735 enh4869
Liver Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs573610856[chr18:56209361]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56208771 56209455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824184
chr18 56208771 56209455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338426
chr18 56208837 56209433 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824185
chr18 56208837 56209433 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338427
chr18 56208849 56209439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824187
chr18 56208849 56209439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338429
chr18 56208849 56209675 IKZF1 UCSC Txn Factor no Conserved 108338430
chr18 56208863 56209379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824188
chr18 56208863 56209379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338431
chr18 56208903 56209375 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824189
chr18 56208903 56209375 NFIC UCSC Txn Factor no Conserved 108338432
chr18 56208903 56209375 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338433
chr18 56209024 56209368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824210
chr18 56209024 56209368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338458
chr18 56209085 56209675 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824214
chr18 56209085 56209675 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338462
chr18 56209160 56209520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824216
chr18 56209160 56209520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338464
chr18 56209187 56209597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824217
chr18 56209187 56209597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338465
chr18 56209266 56209530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824218
chr18 56209266 56209530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338466
chr18 56209345 56209365 RREB1 JASPAR yes 110957057
Genes associated with rs573610856[chr18:56209361], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More