EnhancerDB
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  3. rs573709419[chr16:87817529]
Enhancers that have rs573709419[chr16:87817529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs573709419[chr16:87817529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87817287 87817642 ZNF274 GTRD no Bone Marrow (K562) 21734466
chr16 87817309 87817732 ZNF274 GTRD no Blood (GM12878) 21734467
chr16 87817376 87817698 ZNF274 GTRD no Blood (GM12878) 21734468
chr16 87817515 87817535 RREB1 JASPAR yes 12238906
chr16 87817519 87817539 RREB1 JASPAR yes 12238907
chr16 87817520 87817530 ZNF740 JASPAR yes 12238908
chr16 87817520 87817534 GLIS2 JASPAR yes 12238909
chr16 87817520 87817534 GLIS3 JASPAR yes 12238910
chr16 87817520 87817535 ZIC4 JASPAR yes 12238911
chr16 87817521 87817541 RREB1 JASPAR yes 12238912
Genes associated with rs573709419[chr16:87817529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More