EnhancerDB
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  3. rs573773076[chr1:54838798]
Enhancers that have rs573773076[chr1:54838798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs573773076[chr1:54838798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54838788 54838800 NHLH1 JASPAR yes 28979330
chr1 54838789 54838799 NHLH1 JASPAR yes 28979331
chr1 54838795 54838806 USF2 JASPAR yes 28979332
chr1 54838795 54838807 PKNOX1 JASPAR yes 28979333
chr1 54838795 54838807 PKNOX2 JASPAR yes 28979334
chr1 54838795 54838807 TGIF2 JASPAR yes 28979335
chr1 54838798 54838803 USF2 TRANSFAC yes 28979336
Genes associated with rs573773076[chr1:54838798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More