EnhancerDB
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  3. rs573844474[chr17:38670989]
Enhancers that have rs573844474[chr17:38670989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573844474[chr17:38670989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38670758 38671198 ZNF274 GTRD no Bone Marrow (K562) 21754342
chr17 38670919 38671693 TCF7L2 GTRD no Colon (HCT116) 21754343
chr17 38670983 38670989 GATA3 JASPAR yes 54219923
chr17 38670984 38671749 TCF7L2 GTRD no Colon (HCT116) 21754344
chr17 38670989 38670994 SP1 TRANSFAC yes 54219924
Genes associated with rs573844474[chr17:38670989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More