EnhancerDB
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  3. rs573884196[chr1:209568569]
Enhancers that have rs573884196[chr1:209568569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs573884196[chr1:209568569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209568558 209568572 E2F7 JASPAR yes 34970741
chr1 209568561 209568572 E2F6 JASPAR yes 34970742
chr1 209568562 209568583 IRF1 JASPAR yes 34970743
chr1 209568566 209568581 FOXP1 JASPAR yes 34970744
chr1 209568567 209568582 FOXP1 JASPAR yes 34970745
chr1 209568567 209568588 IRF1 JASPAR yes 34970746
chr1 209568568 209568583 FOXP1 JASPAR yes 34970747
Genes associated with rs573884196[chr1:209568569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More