EnhancerDB
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  3. rs573892[chr6:86118189]
Enhancers that have rs573892[chr6:86118189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 86109285 86118699 enh23394
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs573892[chr6:86118189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 86118186 86118200 RXRG JASPAR yes 103252572
chr6 86118186 86118201 NR2C2 JASPAR yes 103252573
Genes associated with rs573892[chr6:86118189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More