EnhancerDB
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  3. rs573927226[chr6:25165490]
Enhancers that have rs573927226[chr6:25165490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs573927226[chr6:25165490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25165478 25165496 IRF2 JASPAR yes 100830164
chr6 25165479 25165495 SOX4 JASPAR yes 100830165
chr6 25165479 25165500 IRF1 JASPAR yes 100830166
chr6 25165480 25165495 SOX21 JASPAR yes 100830167
chr6 25165481 25165496 PRDM1 JASPAR yes 100830168
chr6 25165482 25165493 PHOX2A JASPAR yes 100830169
chr6 25165482 25165493 PROP1 JASPAR yes 100830170
chr6 25165483 25165497 IRF7 JASPAR yes 100830171
chr6 25165483 25165498 IRF9 JASPAR yes 100830172
chr6 25165485 25165499 POU4F1 JASPAR yes 100830173
chr6 25165485 25165501 POU4F2 JASPAR yes 100830174
chr6 25165485 25165501 POU4F3 JASPAR yes 100830175
chr6 25165488 25165492 YY1 TRANSFAC yes 100830176
Genes associated with rs573927226[chr6:25165490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More