EnhancerDB
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  3. rs573936341[chr1:201675962]
Enhancers that have rs573936341[chr1:201675962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs573936341[chr1:201675962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201675954 201675969 HNF1A JASPAR yes 34522481
chr1 201675955 201675968 HNF1B JASPAR yes 34522482
chr1 201675956 201675968 HNF1B JASPAR yes 34522486
chr1 201675958 201675968 GSX2 JASPAR yes 34522487
chr1 201675958 201675968 HOXB2 JASPAR yes 34522488
chr1 201675958 201675968 HOXB3 JASPAR yes 34522489
chr1 201675958 201675968 MNX1 JASPAR yes 34522490
chr1 201675958 201675968 POU6F1 JASPAR yes 34522491
chr1 201675958 201675969 HOXA10 JASPAR yes 34522492
chr1 201675959 201675967 LMX1A JASPAR yes 34522493
chr1 201675959 201675967 LMX1B JASPAR yes 34522494
chr1 201675959 201675967 NKX6-1 JASPAR yes 34522495
chr1 201675959 201675967 NKX6-2 JASPAR yes 34522496
chr1 201675959 201675967 VAX1 JASPAR yes 34522497
chr1 201675959 201675967 VAX2 JASPAR yes 34522498
chr1 201675959 201675967 VSX1 JASPAR yes 34522499
chr1 201675959 201675967 VSX2 JASPAR yes 34522500
chr1 201675959 201675973 POU1F1 JASPAR yes 34522501
chr1 201675960 201675973 POU3F3 JASPAR yes 34522502
Genes associated with rs573936341[chr1:201675962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More