EnhancerDB
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  3. rs573959313[chr6:17716166]
Enhancers that have rs573959313[chr6:17716166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
chr6 17714698 17716584 vista1417
VISTA
Transcript factors that have rs573959313[chr6:17716166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17716163 17716178 FOXP1 JASPAR yes 22254235
chr6 17716163 17716178 FOXP1 JASPAR yes 100396107
chr6 17716165 17716180 FOXP1 JASPAR yes 22254236
chr6 17716165 17716180 FOXP1 JASPAR yes 100396108
chr6 17716166 17716187 IRF1 JASPAR yes 22254237
chr6 17716166 17716187 IRF1 JASPAR yes 100396109
Genes associated with rs573959313[chr6:17716166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More