EnhancerDB
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  3. rs573989455[chr12:50938005]
Enhancers that have rs573989455[chr12:50938005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs573989455[chr12:50938005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50936396 50938084 ZNF274 GTRD no Bone Marrow (K562) 21545250
chr12 50936396 50938084 ZNF274 GTRD no Bone Marrow (K562) 108031434
chr12 50938002 50938017 FOXP1 JASPAR yes 120841365
chr12 50938003 50938018 FOXP1 JASPAR yes 120841366
chr12 50938004 50938019 FOXP1 JASPAR yes 120841367
Genes associated with rs573989455[chr12:50938005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More