EnhancerDB
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  3. rs574000319[chr2:228280201]
Enhancers that have rs574000319[chr2:228280201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574000319[chr2:228280201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228280180 228280201 ZNF263 JASPAR yes 81521008
chr2 228280181 228280202 IRF1 JASPAR yes 81521009
chr2 228280181 228280202 ZNF263 JASPAR yes 81521010
chr2 228280185 228280206 IRF1 JASPAR yes 81521011
chr2 228280187 228280208 IRF1 JASPAR yes 81521012
chr2 228280189 228280210 ZNF263 JASPAR yes 81521013
chr2 228280191 228280206 FOXP1 JASPAR yes 81521014
chr2 228280191 228280212 IRF1 JASPAR yes 81521015
chr2 228280192 228280207 FOXP1 JASPAR yes 81521016
chr2 228280192 228280213 IRF1 JASPAR yes 81521017
chr2 228280193 228280208 FOXP1 JASPAR yes 81521018
chr2 228280195 228280210 FOXP1 JASPAR yes 81521019
chr2 228280196 228280211 STAT2 JASPAR yes 81521020
chr2 228280196 228280217 IRF1 JASPAR yes 81521021
chr2 228280197 228280212 FOXP1 JASPAR yes 81521022
chr2 228280197 228280218 IRF1 JASPAR yes 81521023
chr2 228280201 228280222 IRF1 JASPAR yes 81521024
Genes associated with rs574000319[chr2:228280201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More