EnhancerDB
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  3. rs574043771[chr1:25058474]
Enhancers that have rs574043771[chr1:25058474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574043771[chr1:25058474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25058471 25058486 FOXP1 JASPAR yes 27524612
chr1 25058472 25058487 FOXP1 JASPAR yes 27524613
chr1 25058473 25058488 FOXP1 JASPAR yes 27524614
chr1 25058474 25058489 FOXP1 JASPAR yes 27524615
chr1 25058474 25058495 IRF1 JASPAR yes 27524616
Genes associated with rs574043771[chr1:25058474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More