EnhancerDB
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  3. rs574073532[chr1:228951261]
Enhancers that have rs574073532[chr1:228951261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228943323 228952195 enh12751
Cervix (HeLa-S3) Large Intestine Blood (T-cell) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs574073532[chr1:228951261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228950582 228951391 ZNF143 GTRD no Epithelial (MCF-7) 21388776
chr1 228950719 228951311 ZNF143 GTRD no Epithelial (MCF-7) 21388777
chr1 228950744 228951307 ZNF143 GTRD no Epithelial (MCF-7) 21388778
chr1 228950810 228951318 ZNF143 GTRD no Epithelial (MCF-7) 21388782
chr1 228951252 228951267 FOXP1 JASPAR yes 35931972
chr1 228951253 228951268 FOXP1 JASPAR yes 35931973
chr1 228951254 228951269 FOXP1 JASPAR yes 35931974
chr1 228951261 228951271 HOXA13 JASPAR yes 35931975
chr1 228951261 228951271 HOXB13 JASPAR yes 35931976
chr1 228951261 228951271 HOXC10 JASPAR yes 35931977
chr1 228951261 228951271 HOXD11 JASPAR yes 35931978
chr1 228951261 228951271 HOXD13 JASPAR yes 35931979
chr1 228951261 228951272 HOXA10 JASPAR yes 35931980
chr1 228951261 228951272 HOXC11 JASPAR yes 35931981
chr1 228951261 228951272 HOXC12 JASPAR yes 35931982
chr1 228951261 228951272 HOXC13 JASPAR yes 35931983
chr1 228951261 228951272 HOXD12 JASPAR yes 35931984
Genes associated with rs574073532[chr1:228951261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More