EnhancerDB
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  3. rs574117909[chr2:228268260]
Enhancers that have rs574117909[chr2:228268260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574117909[chr2:228268260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228268255 228268261 GATA1 TRANSFAC yes 81519304
chr2 228268255 228268263 GATA5 JASPAR yes 81519305
chr2 228268258 228268270 PROX1 JASPAR yes 81519306
Genes associated with rs574117909[chr2:228268260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More