EnhancerDB
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  3. rs57419553[chr1:206896697]
Enhancers that have rs57419553[chr1:206896697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs57419553[chr1:206896697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206893851 206898069 ZNF143 GTRD no Epithelial (MCF-7) 21372573
chr1 206893851 206898069 ZNF143 GTRD no Epithelial (MCF-7) 107863399
chr1 206894644 206897154 ZNF143 GTRD no Epithelial (MCF-7) 21372574
chr1 206894644 206897154 ZNF143 GTRD no Epithelial (MCF-7) 107863400
chr1 206894865 206897401 ZNF274 GTRD no Cervix (HeLa-S3) 21372575
chr1 206894865 206897401 ZNF274 GTRD no Cervix (HeLa-S3) 107863401
chr1 206894969 206897738 ZNF274 GTRD no Cervix (HeLa-S3) 21372576
chr1 206894969 206897738 ZNF274 GTRD no Cervix (HeLa-S3) 107863402
chr1 206896695 206896704 NFIX JASPAR yes 34822584
chr1 206896695 206896705 NFIA JASPAR yes 34822585
chr1 206896697 206896703 NFIC JASPAR yes 34822586
Genes associated with rs57419553[chr1:206896697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More