EnhancerDB
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  3. rs574208069[chr18:56210259]
Enhancers that have rs574208069[chr18:56210259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56204885 56211735 enh4869
Liver Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs574208069[chr18:56210259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56210251 56210261 GSC2 JASPAR yes 110957169
chr18 56210251 56210261 GSC JASPAR yes 110957170
chr18 56210252 56210260 OTX1 JASPAR yes 110957171
chr18 56210252 56210260 OTX2 JASPAR yes 110957172
chr18 56210252 56210260 RHOXF1 JASPAR yes 110957173
chr18 56210252 56210261 PITX3 JASPAR yes 110957174
chr18 56210255 56210264 PITX3 JASPAR yes 110957175
chr18 56210256 56210264 RHOXF1 JASPAR yes 110957176
chr18 56210257 56210267 PAX3 JASPAR yes 110957177
chr18 56210257 56210267 PAX7 JASPAR yes 110957178
chr18 56210257 56210268 PROP1 JASPAR yes 110957179
chr18 56210258 56210276 SRF JASPAR yes 110957180
chr18 56210259 56210274 MEF2C JASPAR yes 110957181
Genes associated with rs574208069[chr18:56210259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More