EnhancerDB
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  3. rs574215825[chr2:38921986]
Enhancers that have rs574215825[chr2:38921986]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs574215825[chr2:38921986]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38921971 38921988 ESR1 JASPAR yes 73165676
chr2 38921971 38921989 ESR2 JASPAR yes 73165677
chr2 38921975 38921989 TLX1 JASPAR yes 73165678
Genes associated with rs574215825[chr2:38921986], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More