EnhancerDB
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  3. rs574253470[chr17:57448309]
Enhancers that have rs574253470[chr17:57448309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs574253470[chr17:57448309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 21774797
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275852
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275853
chr17 57448291 57448311 RREB1 JASPAR yes 55053630
chr17 57448295 57448310 FOXP1 JASPAR yes 55053632
chr17 57448296 57448316 RREB1 JASPAR yes 55053634
chr17 57448296 57448317 IRF1 JASPAR yes 55053635
chr17 57448297 57448318 IRF1 JASPAR yes 55053636
chr17 57448301 57448315 IRF7 JASPAR yes 55053637
chr17 57448302 57448322 RREB1 JASPAR yes 55053638
chr17 57448302 57448323 IRF1 JASPAR yes 55053639
chr17 57448303 57448309 TCF4 TRANSFAC yes 55053640
chr17 57448303 57448318 FOXP1 JASPAR yes 55053641
chr17 57448303 57448324 IRF1 JASPAR yes 55053642
chr17 57448307 57448325 IRF2 JASPAR yes 55053643
chr17 57448308 57448329 IRF1 JASPAR yes 55053644
chr17 57448309 57448315 TCF4 TRANSFAC yes 55053645
Genes associated with rs574253470[chr17:57448309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More