EnhancerDB
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  3. rs574308794[chr1:201422025]
Enhancers that have rs574308794[chr1:201422025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574308794[chr1:201422025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201421579 201423197 MEF2B GTRD no Blood (Karpas-422) 21364046
chr1 201421614 201422613 ZNF143 GTRD no Epithelial (MCF-7) 21364047
chr1 201422014 201422034 RREB1 JASPAR yes 34495126
chr1 201422017 201422029 IRF1 JASPAR yes 34495127
chr1 201422018 201422033 FOXP1 JASPAR yes 34495128
chr1 201422020 201422040 RREB1 JASPAR yes 34495129
chr1 201422022 201422037 FOXP1 JASPAR yes 34495130
chr1 201422023 201422034 FOXA1 JASPAR yes 34495131
chr1 201422023 201422038 FOXA1 JASPAR yes 34495132
chr1 201422024 201422036 FOXC2 JASPAR yes 34495133
chr1 201422024 201422044 RREB1 JASPAR yes 34495134
chr1 201422025 201422037 FOXI1 JASPAR yes 34495135
chr1 201422025 201422045 RREB1 JASPAR yes 34495136
Genes associated with rs574308794[chr1:201422025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More