EnhancerDB
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  3. rs574329590[chr1:38495130]
Enhancers that have rs574329590[chr1:38495130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38489029 38498761 enh26635
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Peripheral Blood (MM.1S) Breast Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr1 38494689 38495688 vista25
VISTA
Transcript factors that have rs574329590[chr1:38495130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38495127 38495139 FOXI1 JASPAR yes 28191487
chr1 38495127 38495139 FOXI1 JASPAR yes 71125519
chr1 38495129 38495139 MEF2A JASPAR yes 28191488
chr1 38495129 38495139 MEF2A JASPAR yes 71125520
chr1 38495129 38495140 FOXB1 JASPAR yes 28191489
chr1 38495129 38495140 FOXC1 JASPAR yes 28191490
chr1 38495129 38495140 FOXB1 JASPAR yes 71125521
chr1 38495129 38495140 FOXC1 JASPAR yes 71125522
chr1 38495130 38495134 YY1 TRANSFAC yes 28191491
chr1 38495130 38495134 YY1 TRANSFAC yes 71125523
Genes associated with rs574329590[chr1:38495130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More