EnhancerDB
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  3. rs574387543[chr17:2852683]
Enhancers that have rs574387543[chr17:2852683]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs574387543[chr17:2852683]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2852672 2852687 SOX21 JASPAR yes 52788557
chr17 2852677 2852691 JUN JASPAR yes 52788558
chr17 2852680 2852691 FOSL2 JASPAR yes 52788559
chr17 2852680 2852691 JUNB JASPAR yes 52788560
chr17 2852681 2852692 FOS JASPAR yes 52788561
chr17 2852681 2852692 FOSL1 JASPAR yes 52788562
chr17 2852681 2852692 JUND JASPAR yes 52788563
chr17 2852683 2852690 JUN TRANSFAC yes 52788564
Genes associated with rs574387543[chr17:2852683], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More