EnhancerDB
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  3. rs57439856[chr12:125167584]
Enhancers that have rs57439856[chr12:125167584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125167246 125167625 vista15316
VISTA
Transcript factors that have rs57439856[chr12:125167584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125167227 125167757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581677
chr12 125167227 125167757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069414
chr12 125167261 125167777 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581678
chr12 125167261 125167777 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069415
chr12 125167338 125167709 ZBTB33 GTRD no Lung (A549) 108069416
chr12 125167407 125167623 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069417
chr12 125167430 125167960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581679
chr12 125167430 125167960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069418
chr12 125167522 125168025 ZNF143 GTRD no Epithelial (MCF-7) 21581680
chr12 125167522 125168025 ZNF143 GTRD no Epithelial (MCF-7) 108069419
chr12 125167524 125168106 TCF7L2 GTRD no Colon (HCT116) 21581681
chr12 125167524 125168106 TCF7L2 GTRD no Colon (HCT116) 108069420
chr12 125167574 125167595 IRF1 JASPAR yes 82497057
chr12 125167574 125167595 IRF1 JASPAR yes 124408240
chr12 125167576 125167591 STAT2 JASPAR yes 82497058
chr12 125167576 125167591 STAT2 JASPAR yes 124408241
chr12 125167577 125167591 STAT1 JASPAR yes 82497059
chr12 125167577 125167591 STAT1 JASPAR yes 124408242
chr12 125167578 125167592 IRF7 JASPAR yes 82497061
chr12 125167578 125167592 IRF8 JASPAR yes 82497062
chr12 125167578 125167592 ONECUT2 JASPAR yes 82497063
chr12 125167578 125167592 IRF7 JASPAR yes 124408244
chr12 125167578 125167592 IRF8 JASPAR yes 124408245
chr12 125167578 125167592 ONECUT2 JASPAR yes 124408246
chr12 125167578 125167593 IRF9 JASPAR yes 82497064
chr12 125167578 125167593 IRF9 JASPAR yes 124408247
chr12 125167584 125167589 H4TF1 TRANSFAC yes 82497065
chr12 125167584 125167589 H4TF1 TRANSFAC yes 124408248
Genes associated with rs57439856[chr12:125167584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More