EnhancerDB
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  3. rs574454959[chr1:22223796]
Enhancers that have rs574454959[chr1:22223796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22216373 22262695 enh11593
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs574454959[chr1:22223796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22223793 22223808 TFAP2A JASPAR yes 27328835
chr1 22223793 22223808 TFAP2C JASPAR yes 27328836
chr1 22223795 22223810 TFAP2A JASPAR yes 27328837
chr1 22223795 22223810 TFAP2C JASPAR yes 27328838
chr1 22223796 22223807 TFAP2A JASPAR yes 27328839
chr1 22223796 22223807 TFAP2B JASPAR yes 27328840
chr1 22223796 22223807 TFAP2C JASPAR yes 27328841
Genes associated with rs574454959[chr1:22223796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More