EnhancerDB
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  3. rs574533071[chr1:17887777]
Enhancers that have rs574533071[chr1:17887777]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs574533071[chr1:17887777]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17887763 17887777 GLIS2 JASPAR yes 27101937
chr1 17887763 17887778 NR2C2 JASPAR yes 27101938
chr1 17887767 17887777 SP1 JASPAR yes 27101943
Genes associated with rs574533071[chr1:17887777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More