EnhancerDB
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  3. rs574534789[chr17:25850430]
Enhancers that have rs574534789[chr17:25850430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs574534789[chr17:25850430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25850410 25850431 IRF1 JASPAR yes 53640608
chr17 25850411 25850432 IRF1 JASPAR yes 53640610
chr17 25850416 25850437 IRF1 JASPAR yes 53640613
chr17 25850419 25850433 SPIC JASPAR yes 53640614
chr17 25850420 25850434 STAT1 JASPAR yes 53640615
chr17 25850420 25850435 PRDM1 JASPAR yes 53640616
chr17 25850420 25850435 STAT2 JASPAR yes 53640617
Genes associated with rs574534789[chr17:25850430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More