EnhancerDB
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  3. rs574539968[chr1:110419968]
Enhancers that have rs574539968[chr1:110419968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs574539968[chr1:110419968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110419545 110420215 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820469
chr1 110419707 110420112 ZNF274 GTRD no Bone Marrow (K562) 21328128
chr1 110419707 110420112 ZNF274 GTRD no Bone Marrow (K562) 107820470
chr1 110419762 110420292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328129
chr1 110419762 110420292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820471
chr1 110419779 110420269 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820472
chr1 110419814 110420474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328130
chr1 110419814 110420474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820473
chr1 110419817 110420193 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820474
chr1 110419817 110420321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328131
chr1 110419817 110420321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820475
chr1 110419820 110420485 POLR2A UCSC Txn Factor no Conserved 107820476
chr1 110419821 110420361 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107820477
chr1 110419830 110420240 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107820478
chr1 110419832 110420348 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328132
chr1 110419832 110420348 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820479
chr1 110419833 110420309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328133
chr1 110419833 110420309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820480
chr1 110419840 110420106 ZNF274 GTRD no Blood (GM12878) 107820481
chr1 110419843 110420203 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328134
chr1 110419843 110420203 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820482
chr1 110419850 110420180 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820483
chr1 110419864 110420137 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820484
chr1 110419866 110420210 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820485
chr1 110419870 110420520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328135
chr1 110419870 110420520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820486
chr1 110419872 110420256 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328136
chr1 110419872 110420256 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820487
chr1 110419895 110420199 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820488
chr1 110419906 110420236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328137
chr1 110419906 110420236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820489
chr1 110419906 110420302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328138
chr1 110419906 110420302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820490
chr1 110419913 110420353 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328139
chr1 110419913 110420353 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820491
chr1 110419914 110420370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328140
chr1 110419914 110420370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820492
chr1 110419919 110420218 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328141
chr1 110419919 110420218 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820493
chr1 110419925 110420281 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328142
chr1 110419925 110420281 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820494
chr1 110419937 110420401 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328143
chr1 110419937 110420401 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820495
chr1 110419952 110420232 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328144
chr1 110419952 110420232 CEBPB UCSC Txn Factor no Conserved 107820496
chr1 110419952 110420232 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820497
chr1 110419952 110420276 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820498
chr1 110419953 110419968 TFAP2A JASPAR yes 31448808
chr1 110419953 110420177 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328145
chr1 110419953 110420177 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820499
chr1 110419966 110420222 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107820500
chr1 110419966 110420496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328146
chr1 110419966 110420496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820501
chr1 110419968 110419972 LFA1 TRANSFAC yes 31448810
Genes associated with rs574539968[chr1:110419968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More