EnhancerDB
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  3. rs574542362[chr17:39012186]
Enhancers that have rs574542362[chr17:39012186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39001145 39015955 enh17144
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs574542362[chr17:39012186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39011920 39012186 SOX2 GTRD no Neural Stem Cells (H9) 21756992
chr17 39011964 39012988 ZBTB33 GTRD no Lung (A549) 108257905
chr17 39011983 39012890 ZBTB33 GTRD no Lung (A549) 108257906
chr17 39011992 39012774 ZNF274 GTRD no Liver (HepG2) 108257907
chr17 39012012 39012684 ZNF274 GTRD no Liver (HepG2) 108257908
chr17 39012072 39012702 ZBTB33 GTRD no Lung (A549) 108257909
chr17 39012097 39012649 ZNF143 GTRD no Epithelial (MCF-7) 21756993
chr17 39012097 39012649 ZNF143 GTRD no Epithelial (MCF-7) 108257910
chr17 39012124 39012536 ZBTB33 GTRD no Lung (A549) 108257911
chr17 39012153 39012539 ZNF143 GTRD no Epithelial (MCF-7) 21756994
chr17 39012153 39012539 ZNF143 GTRD no Epithelial (MCF-7) 108257912
chr17 39012172 39012598 ZNF143 GTRD no Epithelial (MCF-7) 21756995
chr17 39012172 39012598 ZNF143 GTRD no Epithelial (MCF-7) 108257913
chr17 39012174 39012688 TCF7L2 GTRD no Colon (HCT116) 21756996
chr17 39012174 39012688 TCF7L2 GTRD no Colon (HCT116) 108257914
Genes associated with rs574542362[chr17:39012186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More