EnhancerDB
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  3. rs574549471[chr19:2578034]
Enhancers that have rs574549471[chr19:2578034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs574549471[chr19:2578034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 21837210
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 108362532
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 21837211
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 108362533
chr19 2577820 2580234 TCF7L2 GTRD no Colon (HCT116) 108362534
chr19 2577826 2579974 ZNF274 GTRD no Cervix (HeLa-S3) 21837212
chr19 2577826 2579974 ZNF274 GTRD no Cervix (HeLa-S3) 108362535
chr19 2577826 2580119 ZNF274 GTRD no Blood (GM12878) 21837213
chr19 2577826 2580119 ZNF274 GTRD no Blood (GM12878) 108362536
chr19 2577855 2580415 ZBTB33 GTRD no Lung (A549) 108362537
chr19 2577857 2579978 ZBTB33 GTRD no Lung (A549) 108362538
chr19 2577915 2580286 ZNF274 GTRD no Cervix (HeLa-S3) 21837214
chr19 2577915 2580286 ZNF274 GTRD no Cervix (HeLa-S3) 108362539
chr19 2577941 2579931 ZBTB33 GTRD no Brain (SK-N-SH) 21837215
chr19 2577941 2579931 ZBTB33 GTRD no Brain (SK-N-SH) 108362540
chr19 2577974 2580210 ZBTB33 GTRD no Lung (A549) 108362541
chr19 2577997 2580035 ZNF274 GTRD no Liver (HepG2) 21837216
chr19 2577997 2580035 ZNF274 GTRD no Liver (HepG2) 108362542
chr19 2578019 2579976 ZBTB33 GTRD no Lung (A549) 108362543
chr19 2578027 2580034 ZBTB33 GTRD no Lung (A549) 108362544
Genes associated with rs574549471[chr19:2578034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More