EnhancerDB
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  3. rs574560034[chr1:228075060]
Enhancers that have rs574560034[chr1:228075060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr1 228074836 228075224 vista5403
VISTA
Transcript factors that have rs574560034[chr1:228075060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228074711 228076085 TCF7L2 GTRD no Colon (HCT116) 107876779
chr1 228074795 228076498 ZNF274 GTRD no Blood (GM12878) 107876780
chr1 228074822 228075132 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388283
chr1 228074822 228075132 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107876781
chr1 228074828 228075104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388284
chr1 228074828 228075104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107876782
chr1 228074833 228076722 ZNF274 GTRD no Cervix (HeLa-S3) 21388285
chr1 228074833 228076722 ZNF274 GTRD no Cervix (HeLa-S3) 107876783
chr1 228074929 228075856 ZNF274 GTRD no Bone Marrow (K562) 21388286
chr1 228074929 228075856 ZNF274 GTRD no Bone Marrow (K562) 107876784
chr1 228074937 228076387 ZNF274 GTRD no Blood (GM12878) 107876785
chr1 228074974 228075382 ZNF274 GTRD no Blood (GM12878) 107876786
chr1 228074985 228075914 ZNF274 GTRD no Bone Marrow (K562) 21388287
chr1 228074985 228075914 ZNF274 GTRD no Bone Marrow (K562) 107876787
chr1 228074986 228076838 ZBTB33 GTRD no Lung (A549) 107876788
chr1 228075004 228076363 ZNF143 GTRD no Epithelial (MCF-7) 21388288
chr1 228075004 228076363 ZNF143 GTRD no Epithelial (MCF-7) 107876789
chr1 228075005 228075783 TCF7L2 GTRD no Colon (HCT116) 107876790
chr1 228075015 228076890 ZNF274 GTRD no Blood (GM12878) 107876791
chr1 228075030 228075778 TCF7L2 GTRD no Colon (HCT116) 107876792
chr1 228075031 228075984 ZBTB33 GTRD no Lung (A549) 107876793
chr1 228075046 228076642 ZNF274 GTRD no Bone Marrow (K562) 21388289
chr1 228075046 228076642 ZNF274 GTRD no Bone Marrow (K562) 107876794
chr1 228075048 228075069 ZNF263 JASPAR yes 35890674
chr1 228075048 228075069 ZNF263 JASPAR yes 118473537
chr1 228075049 228075070 ZNF263 JASPAR yes 35890675
chr1 228075049 228075070 ZNF263 JASPAR yes 118473538
chr1 228075052 228075073 ZNF263 JASPAR yes 35890676
chr1 228075052 228075073 ZNF263 JASPAR yes 118473539
chr1 228075053 228075063 ZNF740 JASPAR yes 35890677
chr1 228075053 228075063 ZNF740 JASPAR yes 118473540
chr1 228075057 228075067 SP1 JASPAR yes 35890678
chr1 228075057 228075067 SP1 JASPAR yes 118473541
chr1 228075059 228075080 ZNF263 JASPAR yes 35890679
chr1 228075059 228075080 ZNF263 JASPAR yes 118473542
chr1 228075060 228075073 ELF1 JASPAR yes 35890680
chr1 228075060 228075073 ELF1 JASPAR yes 118473543
chr1 228075060 228075081 ZNF263 JASPAR yes 35890681
chr1 228075060 228075081 ZNF263 JASPAR yes 118473544
chr1 228075060 228076174 TCF7L2 GTRD no Colon (HCT116) 107876795
Genes associated with rs574560034[chr1:228075060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More