EnhancerDB
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  3. rs574626008[chr18:55463109]
Enhancers that have rs574626008[chr18:55463109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574626008[chr18:55463109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55463104 55463125 IRF1 JASPAR yes 110887426
chr18 55463105 55463120 FOXP1 JASPAR yes 110887427
chr18 55463107 55463113 TBP TRANSFAC yes 110887428
chr18 55463108 55463123 PRDM1 JASPAR yes 110887429
chr18 55463108 55463123 STAT2 JASPAR yes 110887430
Genes associated with rs574626008[chr18:55463109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More