EnhancerDB
  1. Home
  2. SNP
  3. rs574664175[chr17:49020490]
Enhancers that have rs574664175[chr17:49020490]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs574664175[chr17:49020490]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49020480 49020496 SOX4 JASPAR yes 54737134
chr17 49020485 49020495 SREBF1 JASPAR yes 54737135
chr17 49020485 49020495 SREBF2 JASPAR yes 54737136
chr17 49020490 49020498 NR4A2 JASPAR yes 54737137
Genes associated with rs574664175[chr17:49020490], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More